Software

• Using software
  • Module system basics
    • Available modules
    • Module names
    • Searching for modules
    • Info on modules
    • Loading modules
    • Conflicting modules
    • List loaded modules
    • Unloading modules
    • Purging modules
    • Collections of modules
    • Specialized software stacks
  • Setting up the environment using Lmod at the HPC-UGent clusters
    • Quick introduction
    • Module commands: using module (or ml)
    • Lmod vs Tcl-based environment modules
  • The module system on Leuven clusters
    • Module organization
    • The cluster modules
    • Manually modifying the modulepath
  • Packages with additional documentation
    • MATLAB (a package by MathWorks)
    • R
  • Programming Languages
• Software development
  • Programming paradigms
    • MPI distributed programming
    • OpenMP for shared memory programming
    • Hybrid MPI/OpenMP programs
    • Books about Parallel Computing
  • Development tools
    • Toolchains
    • Intel toolchain
    • FOSS toolchain
    • Intel Trace Analyzer & Collector
    • Eclipse
    • MS Visual Studio
    • ParameterWeaver
    • Version control systems
  • Libraries
    • BLAS and LAPACK
    • Perl package management
    • Python package management
    • R package management
    • Installing R packages with devtools
• Postprocessing tools
  • Visualization software